Slot: sequence

URI: https://github.com/vdjserver/vdjserver-airr-schema/sequence

Applicable Classes

Name	Description	Modifies Slot
RearrangedSequence	Details of a directly observed rearranged sequence or an inference from rearr...	no
UnrearrangedSequence	Details of an unrearranged sequence contributing support for a gene or allele	no
AlleleDescription	Details of a putative or confirmed Ig receptor gene/allele inferred from one ...	no
UndocumentedAllele	Default UndocumentedAllele description	no
Rearrangement	Default Rearrangement description	no

Properties

Type and Range

Property	Value
Range	String
Domain Of	RearrangedSequence, UnrearrangedSequence, AlleleDescription, UndocumentedAllele, Rearrangement

Cardinality and Requirements

Property	Value

Identifier and Mapping Information

Schema Source

• from schema: https://github.com/vdjserver/vdjserver-airr-schema

Mappings

Mapping Type	Mapped Value
self	https://github.com/vdjserver/vdjserver-airr-schema/sequence
native	https://github.com/vdjserver/vdjserver-airr-schema/sequence

LinkML Source

name: sequence
from_schema: https://github.com/vdjserver/vdjserver-airr-schema
rank: 1000
domain_of:
- RearrangedSequence
- UnrearrangedSequence
- AlleleDescription
- UndocumentedAllele
- Rearrangement
range: string