Class: MHCGenotype

Default MHCGenotype description

URI: https://github.com/vdjserver/vdjserver-airr-schema/MHCGenotype

 classDiagram
    class MHCGenotype
    click MHCGenotype href "../MHCGenotype/"
      AIRRStandards <|-- MHCGenotype
        click AIRRStandards href "../AIRRStandards/"

      MHCGenotype : mhc_alleles





        MHCGenotype --> "*" MHCAllele : mhc_alleles
        click MHCAllele href "../MHCAllele/"



      MHCGenotype : mhc_class





        MHCGenotype --> "0..1" MhcClassEnum : mhc_class
        click MhcClassEnum href "../MhcClassEnum/"



      MHCGenotype : mhc_genotype_id

      MHCGenotype : mhc_genotyping_method

Inheritance

AIRRStandards
- MHCGenotype

Slots

Name	Cardinality and Range	Description	Inheritance
mhc_genotype_id	0..1 String	A unique identifier for this MHCGenotype, assumed to be unique in the context...	direct
mhc_class	0..1 MhcClassEnum		direct
mhc_alleles	* MHCAllele	List of MHC alleles of the indicated mhc_class identified in an individual	direct
mhc_genotyping_method	0..1 String	Information on how the genotype was determined	direct

Usages

used by	used in	type	used
MHCGenotypeSet	mhc_genotype_list	range	MHCGenotype

Identifier and Mapping Information

Schema Source

from schema: https://github.com/vdjserver/vdjserver-airr-schema

Mappings

Mapping Type	Mapped Value
self	https://github.com/vdjserver/vdjserver-airr-schema/MHCGenotype
native	https://github.com/vdjserver/vdjserver-airr-schema/MHCGenotype

LinkML Source

Direct

name: MHCGenotype
description: Default MHCGenotype description
from_schema: https://github.com/vdjserver/vdjserver-airr-schema
is_a: AIRRStandards
slots:
- mhc_genotype_id
- mhc_class
- mhc_alleles
- mhc_genotyping_method

Induced

name: MHCGenotype
description: Default MHCGenotype description
from_schema: https://github.com/vdjserver/vdjserver-airr-schema
is_a: AIRRStandards
attributes:
  mhc_genotype_id:
    name: mhc_genotype_id
    description: A unique identifier for this MHCGenotype, assumed to be unique in
      the context of the study
    from_schema: https://github.com/vdjserver/vdjserver-airr-schema
    rank: 1000
    owner: MHCGenotype
    domain_of:
    - MHCGenotype
    range: string
  mhc_class:
    name: mhc_class
    from_schema: https://github.com/vdjserver/vdjserver-airr-schema
    rank: 1000
    owner: MHCGenotype
    domain_of:
    - MHCGenotype
    - Reactivity
    range: MhcClassEnum
  mhc_alleles:
    name: mhc_alleles
    description: List of MHC alleles of the indicated mhc_class identified in an individual
    from_schema: https://github.com/vdjserver/vdjserver-airr-schema
    rank: 1000
    owner: MHCGenotype
    domain_of:
    - MHCGenotype
    range: MHCAllele
    multivalued: true
  mhc_genotyping_method:
    name: mhc_genotyping_method
    description: Information on how the genotype was determined. The content of this
      field should come from a list of recommended terms provided in the AIRR Schema
      documentation.
    from_schema: https://github.com/vdjserver/vdjserver-airr-schema
    rank: 1000
    owner: MHCGenotype
    domain_of:
    - MHCGenotype
    range: string