Slot: v_alignment_start

Start position of the V gene alignment in both the sequence_alignment and germline_alignment fields (1-based closed interval).

URI: https://github.com/vdjserver/vdjserver-airr-schema/v_alignment_start

Applicable Classes

Name	Description	Modifies Slot
Rearrangement	Default Rearrangement description	no

Properties

Type and Range

Property	Value
Range	Integer
Domain Of	Rearrangement

Cardinality and Requirements

Property	Value

Identifier and Mapping Information

Schema Source

• from schema: https://github.com/vdjserver/vdjserver-airr-schema

Mappings

Mapping Type	Mapped Value
self	https://github.com/vdjserver/vdjserver-airr-schema/v_alignment_start
native	https://github.com/vdjserver/vdjserver-airr-schema/v_alignment_start

LinkML Source

name: v_alignment_start
description: Start position of the V gene alignment in both the sequence_alignment
  and germline_alignment fields (1-based closed interval).
from_schema: https://github.com/vdjserver/vdjserver-airr-schema
rank: 1000
domain_of:
- Rearrangement
range: integer