Slot: reactivity_method

The methodology used to assess/classify reactivity. This should be either the assay utlizied in the experiment, delineated as "annotated" if annotated from an external source (e.g. IEDB), or inferred if imputed using a computational method. In future versions we anticipate this field being an enumerated type, and it is strongly recommended that users utilize one of the following keywords in this field if appropriate: native_protein, MHC_peptide_multimer, annotated, inferred.

URI: https://github.com/vdjserver/vdjserver-airr-schema/reactivity_method

Applicable Classes

Name	Description	Modifies Slot
Reactivity	Default Reactivity description	no

Properties

Type and Range

Property	Value
Range	String
Domain Of	Reactivity

Cardinality and Requirements

Property	Value

Identifier and Mapping Information

Annotations

property	value
nullable	False

Schema Source

• from schema: https://github.com/vdjserver/vdjserver-airr-schema

Mappings

Mapping Type	Mapped Value
self	https://github.com/vdjserver/vdjserver-airr-schema/reactivity_method
native	https://github.com/vdjserver/vdjserver-airr-schema/reactivity_method

LinkML Source

name: reactivity_method
annotations:
  nullable:
    tag: nullable
    value: false
description: 'The methodology used to assess/classify reactivity. This should be either
  the assay utlizied in the experiment, delineated as "annotated" if annotated from
  an external source (e.g. IEDB), or inferred if imputed using a computational method.
  In future versions we anticipate this field being an enumerated type, and it is
  strongly recommended that users utilize one of the following keywords in this field
  if appropriate: native_protein, MHC_peptide_multimer, annotated, inferred.'
from_schema: https://github.com/vdjserver/vdjserver-airr-schema
rank: 1000
domain_of:
- Reactivity
range: string