Slot: pcr_target

If a PCR step was performed that specifically targets the IG/TR loci, the target and primer locations need to be provided here. This field holds an array of PCRTarget objects, so that multiplex PCR setups amplifying multiple loci at the same time can be annotated using one record per locus. PCR setups not targeting any specific locus must not annotate this field but select the appropriate library_generation_method instead.

URI: https://github.com/vdjserver/vdjserver-airr-schema/pcr_target

Applicable Classes

Name	Description	Modifies Slot
NucleicAcidProcessing	Default NucleicAcidProcessing description	no
SampleProcessing	Default SampleProcessing description	no

Properties

Type and Range

Property	Value
Range	PCRTarget
Domain Of	NucleicAcidProcessing, SampleProcessing

Cardinality and Requirements

Property	Value
Multivalued	Yes

Identifier and Mapping Information

Annotations

property	value
nullable	False

Schema Source

• from schema: https://github.com/vdjserver/vdjserver-airr-schema

Mappings

Mapping Type	Mapped Value
self	https://github.com/vdjserver/vdjserver-airr-schema/pcr_target
native	https://github.com/vdjserver/vdjserver-airr-schema/pcr_target

LinkML Source

name: pcr_target
annotations:
  nullable:
    tag: nullable
    value: false
description: If a PCR step was performed that specifically targets the IG/TR loci,
  the target and primer locations need to be provided here. This field holds an array
  of PCRTarget objects, so that multiplex PCR setups amplifying multiple loci at the
  same time can be annotated using one record per locus. PCR setups not targeting
  any specific locus must not annotate this field but select the appropriate library_generation_method
  instead.
from_schema: https://github.com/vdjserver/vdjserver-airr-schema
rank: 1000
domain_of:
- NucleicAcidProcessing
- SampleProcessing
range: PCRTarget
multivalued: true