Slot: j_germline_start

Alignment start position in the J gene reference sequence (1-based closed interval).

URI: https://github.com/vdjserver/vdjserver-airr-schema/j_germline_start

Applicable Classes

Name	Description	Modifies Slot
Rearrangement	Default Rearrangement description	no

Properties

Type and Range

Property	Value
Range	Integer
Domain Of	Rearrangement

Cardinality and Requirements

Property	Value

Identifier and Mapping Information

Schema Source

• from schema: https://github.com/vdjserver/vdjserver-airr-schema

Mappings

Mapping Type	Mapped Value
self	https://github.com/vdjserver/vdjserver-airr-schema/j_germline_start
native	https://github.com/vdjserver/vdjserver-airr-schema/j_germline_start

LinkML Source

name: j_germline_start
description: Alignment start position in the J gene reference sequence (1-based closed
  interval).
from_schema: https://github.com/vdjserver/vdjserver-airr-schema
rank: 1000
domain_of:
- Rearrangement
range: integer