Slot: j_alignment_end

End position of the J gene alignment in both the sequence_alignment and germline_alignment fields (1-based closed interval).

URI: https://github.com/vdjserver/vdjserver-airr-schema/j_alignment_end

Applicable Classes

Name	Description	Modifies Slot
Rearrangement	Default Rearrangement description	no

Properties

Type and Range

Property	Value
Range	Integer
Domain Of	Rearrangement

Cardinality and Requirements

Property	Value

Identifier and Mapping Information

Schema Source

• from schema: https://github.com/vdjserver/vdjserver-airr-schema

Mappings

Mapping Type	Mapped Value
self	https://github.com/vdjserver/vdjserver-airr-schema/j_alignment_end
native	https://github.com/vdjserver/vdjserver-airr-schema/j_alignment_end

LinkML Source

name: j_alignment_end
description: End position of the J gene alignment in both the sequence_alignment and
  germline_alignment fields (1-based closed interval).
from_schema: https://github.com/vdjserver/vdjserver-airr-schema
rank: 1000
domain_of:
- Rearrangement
range: integer