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Slot: consensus_count

Number of reads contributing to the UMI consensus or contig assembly for this sequence. For example, the sum of the number of reads for all UMIs that contribute to the query sequence.

URI: https://github.com/vdjserver/vdjserver-airr-schema/consensus_count

Applicable Classes

Name Description Modifies Slot
Rearrangement Default Rearrangement description no

Properties

Type and Range

Property Value
Range Integer
Domain Of Rearrangement

Cardinality and Requirements

Property Value

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self https://github.com/vdjserver/vdjserver-airr-schema/consensus_count
native https://github.com/vdjserver/vdjserver-airr-schema/consensus_count

LinkML Source

name: consensus_count
description: Number of reads contributing to the UMI consensus or contig assembly
  for this sequence. For example, the sum of the number of reads for all UMIs that
  contribute to the query sequence.
from_schema: https://github.com/vdjserver/vdjserver-airr-schema
rank: 1000
domain_of:
- Rearrangement
range: integer